feat: hook-pipeline progress — tests passing

This threads typed hook settings through runtime config, adds a shell-based hook runner, and executes PreToolUse/PostToolUse around each tool call in the conversation loop. The CLI now rebuilds runtimes with settings-derived hook configuration so user-defined Claude hook commands actually run before and after tools.

Constraint: Hook behavior needed to match Claude-style settings.json hooks without broad plugin/MCP parity work in this change
Rejected: Delay hook loading to the tool executor layer | would miss denied tool calls and duplicate runtime policy plumbing
Confidence: medium
Scope-risk: moderate
Reversibility: clean
Directive: Keep hook execution in the runtime loop so permission decisions and tool results remain wrapped by the same conversation semantics
Tested: cargo test; cargo build --release
Not-tested: Real user hook scripts outside the test harness; broader plugin/skills parity

rust/crates/runtime/src/config.rs

@@ -37,13 +37,29 @@ pub struct RuntimeConfig {
 
 #[derive(Debug, Clone, PartialEq, Eq, Default)]
 pub struct RuntimeFeatureConfig {
+    hooks: RuntimeHookConfig,
     mcp: McpConfigCollection,
     oauth: Option<OAuthConfig>,
     model: Option<String>,
     permission_mode: Option<ResolvedPermissionMode>,
+    permission_rules: RuntimePermissionRuleConfig,
     sandbox: SandboxConfig,
 }
 
+#[derive(Debug, Clone, PartialEq, Eq, Default)]
+pub struct RuntimeHookConfig {
+    pre_tool_use: Vec<String>,
+    post_tool_use: Vec<String>,
+    post_tool_use_failure: Vec<String>,
+}
+
+#[derive(Debug, Clone, PartialEq, Eq, Default)]
+pub struct RuntimePermissionRuleConfig {
+    allow: Vec<String>,
+    deny: Vec<String>,
+    ask: Vec<String>,
+}
+
 #[derive(Debug, Clone, PartialEq, Eq, Default)]
 pub struct McpConfigCollection {
     servers: BTreeMap<String, ScopedMcpServerConfig>,
@@ -221,12 +237,14 @@ impl ConfigLoader {
         let merged_value = JsonValue::Object(merged.clone());
 
         let feature_config = RuntimeFeatureConfig {
+            hooks: parse_optional_hooks_config(&merged_value)?,
             mcp: McpConfigCollection {
                 servers: mcp_servers,
             },
             oauth: parse_optional_oauth_config(&merged_value, "merged settings.oauth")?,
             model: parse_optional_model(&merged_value),
             permission_mode: parse_optional_permission_mode(&merged_value)?,
+            permission_rules: parse_optional_permission_rules(&merged_value)?,
             sandbox: parse_optional_sandbox_config(&merged_value)?,
         };
 
@@ -278,6 +296,11 @@ impl RuntimeConfig {
         &self.feature_config.mcp
     }
 
+    #[must_use]
+    pub fn hooks(&self) -> &RuntimeHookConfig {
+        &self.feature_config.hooks
+    }
+
     #[must_use]
     pub fn oauth(&self) -> Option<&OAuthConfig> {
         self.feature_config.oauth.as_ref()
@@ -293,6 +316,11 @@ impl RuntimeConfig {
         self.feature_config.permission_mode
     }
 
+    #[must_use]
+    pub fn permission_rules(&self) -> &RuntimePermissionRuleConfig {
+        &self.feature_config.permission_rules
+    }
+
     #[must_use]
     pub fn sandbox(&self) -> &SandboxConfig {
         &self.feature_config.sandbox
@@ -300,6 +328,17 @@ impl RuntimeConfig {
 }
 
 impl RuntimeFeatureConfig {
+    #[must_use]
+    pub fn with_hooks(mut self, hooks: RuntimeHookConfig) -> Self {
+        self.hooks = hooks;
+        self
+    }
+
+    #[must_use]
+    pub fn hooks(&self) -> &RuntimeHookConfig {
+        &self.hooks
+    }
+
     #[must_use]
     pub fn mcp(&self) -> &McpConfigCollection {
         &self.mcp
@@ -320,12 +359,69 @@ impl RuntimeFeatureConfig {
         self.permission_mode
     }
 
+    #[must_use]
+    pub fn permission_rules(&self) -> &RuntimePermissionRuleConfig {
+        &self.permission_rules
+    }
+
     #[must_use]
     pub fn sandbox(&self) -> &SandboxConfig {
         &self.sandbox
     }
 }
 
+impl RuntimeHookConfig {
+    #[must_use]
+    pub fn new(
+        pre_tool_use: Vec<String>,
+        post_tool_use: Vec<String>,
+        post_tool_use_failure: Vec<String>,
+    ) -> Self {
+        Self {
+            pre_tool_use,
+            post_tool_use,
+            post_tool_use_failure,
+        }
+    }
+
+    #[must_use]
+    pub fn pre_tool_use(&self) -> &[String] {
+        &self.pre_tool_use
+    }
+
+    #[must_use]
+    pub fn post_tool_use(&self) -> &[String] {
+        &self.post_tool_use
+    }
+
+    #[must_use]
+    pub fn post_tool_use_failure(&self) -> &[String] {
+        &self.post_tool_use_failure
+    }
+}
+
+impl RuntimePermissionRuleConfig {
+    #[must_use]
+    pub fn new(allow: Vec<String>, deny: Vec<String>, ask: Vec<String>) -> Self {
+        Self { allow, deny, ask }
+    }
+
+    #[must_use]
+    pub fn allow(&self) -> &[String] {
+        &self.allow
+    }
+
+    #[must_use]
+    pub fn deny(&self) -> &[String] {
+        &self.deny
+    }
+
+    #[must_use]
+    pub fn ask(&self) -> &[String] {
+        &self.ask
+    }
+}
+
 impl McpConfigCollection {
     #[must_use]
     pub fn servers(&self) -> &BTreeMap<String, ScopedMcpServerConfig> {
@@ -424,6 +520,48 @@ fn parse_optional_model(root: &JsonValue) -> Option<String> {
         .map(ToOwned::to_owned)
 }
 
+fn parse_optional_hooks_config(root: &JsonValue) -> Result<RuntimeHookConfig, ConfigError> {
+    let Some(object) = root.as_object() else {
+        return Ok(RuntimeHookConfig::default());
+    };
+    let Some(hooks_value) = object.get("hooks") else {
+        return Ok(RuntimeHookConfig::default());
+    };
+    let hooks = expect_object(hooks_value, "merged settings.hooks")?;
+    Ok(RuntimeHookConfig {
+        pre_tool_use: optional_string_array(hooks, "PreToolUse", "merged settings.hooks")?
+            .unwrap_or_default(),
+        post_tool_use: optional_string_array(hooks, "PostToolUse", "merged settings.hooks")?
+            .unwrap_or_default(),
+        post_tool_use_failure: optional_string_array(
+            hooks,
+            "PostToolUseFailure",
+            "merged settings.hooks",
+        )?
+        .unwrap_or_default(),
+    })
+}
+
+fn parse_optional_permission_rules(
+    root: &JsonValue,
+) -> Result<RuntimePermissionRuleConfig, ConfigError> {
+    let Some(object) = root.as_object() else {
+        return Ok(RuntimePermissionRuleConfig::default());
+    };
+    let Some(permissions) = object.get("permissions").and_then(JsonValue::as_object) else {
+        return Ok(RuntimePermissionRuleConfig::default());
+    };
+
+    Ok(RuntimePermissionRuleConfig {
+        allow: optional_string_array(permissions, "allow", "merged settings.permissions")?
+            .unwrap_or_default(),
+        deny: optional_string_array(permissions, "deny", "merged settings.permissions")?
+            .unwrap_or_default(),
+        ask: optional_string_array(permissions, "ask", "merged settings.permissions")?
+            .unwrap_or_default(),
+    })
+}
+
 fn parse_optional_permission_mode(
     root: &JsonValue,
 ) -> Result<Option<ResolvedPermissionMode>, ConfigError> {
@@ -783,7 +921,7 @@ mod tests {
         .expect("write user compat config");
         fs::write(
             home.join("settings.json"),
-            r#"{"model":"sonnet","env":{"A2":"1"},"hooks":{"PreToolUse":["base"]},"permissions":{"defaultMode":"plan"}}"#,
+            r#"{"model":"sonnet","env":{"A2":"1"},"hooks":{"PreToolUse":["base"]},"permissions":{"defaultMode":"plan","allow":["Read"],"deny":["Bash(rm -rf)"]}}"#,
         )
         .expect("write user settings");
         fs::write(
@@ -793,7 +931,7 @@ mod tests {
         .expect("write project compat config");
         fs::write(
             cwd.join(".claude").join("settings.json"),
-            r#"{"env":{"C":"3"},"hooks":{"PostToolUse":["project"]},"mcpServers":{"project":{"command":"uvx","args":["project"]}}}"#,
+            r#"{"env":{"C":"3"},"hooks":{"PostToolUse":["project"],"PostToolUseFailure":["project-failure"]},"permissions":{"ask":["Edit"]},"mcpServers":{"project":{"command":"uvx","args":["project"]}}}"#,
         )
         .expect("write project settings");
         fs::write(
@@ -836,6 +974,18 @@ mod tests {
             .and_then(JsonValue::as_object)
             .expect("hooks object")
             .contains_key("PostToolUse"));
+        assert_eq!(loaded.hooks().pre_tool_use(), &["base".to_string()]);
+        assert_eq!(loaded.hooks().post_tool_use(), &["project".to_string()]);
+        assert_eq!(
+            loaded.hooks().post_tool_use_failure(),
+            &["project-failure".to_string()]
+        );
+        assert_eq!(loaded.permission_rules().allow(), &["Read".to_string()]);
+        assert_eq!(
+            loaded.permission_rules().deny(),
+            &["Bash(rm -rf)".to_string()]
+        );
+        assert_eq!(loaded.permission_rules().ask(), &["Edit".to_string()]);
         assert!(loaded.mcp().get("home").is_some());
         assert!(loaded.mcp().get("project").is_some());
 

rust/crates/runtime/src/conversation.rs

@@ -4,7 +4,11 @@ use std::fmt::{Display, Formatter};
 use crate::compact::{
     compact_session, estimate_session_tokens, CompactionConfig, CompactionResult,
 };
-use crate::permissions::{PermissionOutcome, PermissionPolicy, PermissionPrompter};
+use crate::config::RuntimeFeatureConfig;
+use crate::hooks::{HookAbortSignal, HookProgressReporter, HookRunResult, HookRunner};
+use crate::permissions::{
+    PermissionContext, PermissionOutcome, PermissionPolicy, PermissionPrompter,
+};
 use crate::session::{ContentBlock, ConversationMessage, Session};
 use crate::usage::{TokenUsage, UsageTracker};
 
@@ -94,6 +98,9 @@ pub struct ConversationRuntime<C, T> {
     system_prompt: Vec<String>,
     max_iterations: usize,
     usage_tracker: UsageTracker,
+    hook_runner: HookRunner,
+    hook_abort_signal: HookAbortSignal,
+    hook_progress_reporter: Option<Box<dyn HookProgressReporter>>,
 }
 
 impl<C, T> ConversationRuntime<C, T>
@@ -108,6 +115,26 @@ where
         tool_executor: T,
         permission_policy: PermissionPolicy,
         system_prompt: Vec<String>,
+    ) -> Self {
+        Self::new_with_features(
+            session,
+            api_client,
+            tool_executor,
+            permission_policy,
+            system_prompt,
+            RuntimeFeatureConfig::default(),
+        )
+    }
+
+    #[must_use]
+    #[allow(clippy::needless_pass_by_value)]
+    pub fn new_with_features(
+        session: Session,
+        api_client: C,
+        tool_executor: T,
+        permission_policy: PermissionPolicy,
+        system_prompt: Vec<String>,
+        feature_config: RuntimeFeatureConfig,
     ) -> Self {
         let usage_tracker = UsageTracker::from_session(&session);
         Self {
@@ -118,6 +145,9 @@ where
             system_prompt,
             max_iterations: usize::MAX,
             usage_tracker,
+            hook_runner: HookRunner::from_feature_config(&feature_config),
+            hook_abort_signal: HookAbortSignal::default(),
+            hook_progress_reporter: None,
         }
     }
 
@@ -127,6 +157,93 @@ where
         self
     }
 
+    #[must_use]
+    pub fn with_hook_abort_signal(mut self, hook_abort_signal: HookAbortSignal) -> Self {
+        self.hook_abort_signal = hook_abort_signal;
+        self
+    }
+
+    #[must_use]
+    pub fn with_hook_progress_reporter(
+        mut self,
+        hook_progress_reporter: Box<dyn HookProgressReporter>,
+    ) -> Self {
+        self.hook_progress_reporter = Some(hook_progress_reporter);
+        self
+    }
+
+    fn run_pre_tool_use_hook(&mut self, tool_name: &str, input: &str) -> HookRunResult {
+        if let Some(reporter) = self.hook_progress_reporter.as_mut() {
+            self.hook_runner.run_pre_tool_use_with_context(
+                tool_name,
+                input,
+                Some(&self.hook_abort_signal),
+                Some(reporter.as_mut()),
+            )
+        } else {
+            self.hook_runner.run_pre_tool_use_with_context(
+                tool_name,
+                input,
+                Some(&self.hook_abort_signal),
+                None,
+            )
+        }
+    }
+
+    fn run_post_tool_use_hook(
+        &mut self,
+        tool_name: &str,
+        input: &str,
+        output: &str,
+        is_error: bool,
+    ) -> HookRunResult {
+        if let Some(reporter) = self.hook_progress_reporter.as_mut() {
+            self.hook_runner.run_post_tool_use_with_context(
+                tool_name,
+                input,
+                output,
+                is_error,
+                Some(&self.hook_abort_signal),
+                Some(reporter.as_mut()),
+            )
+        } else {
+            self.hook_runner.run_post_tool_use_with_context(
+                tool_name,
+                input,
+                output,
+                is_error,
+                Some(&self.hook_abort_signal),
+                None,
+            )
+        }
+    }
+
+    fn run_post_tool_use_failure_hook(
+        &mut self,
+        tool_name: &str,
+        input: &str,
+        output: &str,
+    ) -> HookRunResult {
+        if let Some(reporter) = self.hook_progress_reporter.as_mut() {
+            self.hook_runner.run_post_tool_use_failure_with_context(
+                tool_name,
+                input,
+                output,
+                Some(&self.hook_abort_signal),
+                Some(reporter.as_mut()),
+            )
+        } else {
+            self.hook_runner.run_post_tool_use_failure_with_context(
+                tool_name,
+                input,
+                output,
+                Some(&self.hook_abort_signal),
+                None,
+            )
+        }
+    }
+
+    #[allow(clippy::too_many_lines)]
     pub fn run_turn(
         &mut self,
         user_input: impl Into<String>,
@@ -176,33 +293,85 @@ where
             }
 
             for (tool_use_id, tool_name, input) in pending_tool_uses {
-                let permission_outcome = if let Some(prompt) = prompter.as_mut() {
-                    self.permission_policy
-                        .authorize(&tool_name, &input, Some(*prompt))
+                let pre_hook_result = self.run_pre_tool_use_hook(&tool_name, &input);
+                let effective_input = pre_hook_result
+                    .updated_input()
+                    .map_or_else(|| input.clone(), ToOwned::to_owned);
+                let permission_context = PermissionContext::new(
+                    pre_hook_result.permission_override(),
+                    pre_hook_result.permission_reason().map(ToOwned::to_owned),
+                );
+
+                let permission_outcome = if pre_hook_result.is_cancelled() {
+                    PermissionOutcome::Deny {
+                        reason: format_hook_message(
+                            &pre_hook_result,
+                            &format!("PreToolUse hook cancelled tool `{tool_name}`"),
+                        ),
+                    }
+                } else if pre_hook_result.is_denied() {
+                    PermissionOutcome::Deny {
+                        reason: format_hook_message(
+                            &pre_hook_result,
+                            &format!("PreToolUse hook denied tool `{tool_name}`"),
+                        ),
+                    }
+                } else if let Some(prompt) = prompter.as_mut() {
+                    self.permission_policy.authorize_with_context(
+                        &tool_name,
+                        &effective_input,
+                        &permission_context,
+                        Some(*prompt),
+                    )
                 } else {
-                    self.permission_policy.authorize(&tool_name, &input, None)
+                    self.permission_policy.authorize_with_context(
+                        &tool_name,
+                        &effective_input,
+                        &permission_context,
+                        None,
+                    )
                 };
 
                 let result_message = match permission_outcome {
                     PermissionOutcome::Allow => {
-                        match self.tool_executor.execute(&tool_name, &input) {
-                            Ok(output) => ConversationMessage::tool_result(
-                                tool_use_id,
-                                tool_name,
-                                output,
+                        let (mut output, mut is_error) =
+                            match self.tool_executor.execute(&tool_name, &effective_input) {
+                                Ok(output) => (output, false),
+                                Err(error) => (error.to_string(), true),
+                            };
+                        output = merge_hook_feedback(pre_hook_result.messages(), output, false);
+
+                        let post_hook_result = if is_error {
+                            self.run_post_tool_use_failure_hook(
+                                &tool_name,
+                                &effective_input,
+                                &output,
+                            )
+                        } else {
+                            self.run_post_tool_use_hook(
+                                &tool_name,
+                                &effective_input,
+                                &output,
                                 false,
-                            ),
-                            Err(error) => ConversationMessage::tool_result(
-                                tool_use_id,
-                                tool_name,
-                                error.to_string(),
-                                true,
-                            ),
+                            )
+                        };
+                        if post_hook_result.is_denied() || post_hook_result.is_cancelled() {
+                            is_error = true;
                         }
+                        output = merge_hook_feedback(
+                            post_hook_result.messages(),
+                            output,
+                            post_hook_result.is_denied() || post_hook_result.is_cancelled(),
+                        );
+
+                        ConversationMessage::tool_result(tool_use_id, tool_name, output, is_error)
                     }
-                    PermissionOutcome::Deny { reason } => {
-                        ConversationMessage::tool_result(tool_use_id, tool_name, reason, true)
-                    }
+                    PermissionOutcome::Deny { reason } => ConversationMessage::tool_result(
+                        tool_use_id,
+                        tool_name,
+                        merge_hook_feedback(pre_hook_result.messages(), reason, true),
+                        true,
+                    ),
                 };
                 self.session.messages.push(result_message.clone());
                 tool_results.push(result_message);
@@ -290,6 +459,32 @@ fn flush_text_block(text: &mut String, blocks: &mut Vec<ContentBlock>) {
     }
 }
 
+fn format_hook_message(result: &HookRunResult, fallback: &str) -> String {
+    if result.messages().is_empty() {
+        fallback.to_string()
+    } else {
+        result.messages().join("\n")
+    }
+}
+
+fn merge_hook_feedback(messages: &[String], output: String, denied: bool) -> String {
+    if messages.is_empty() {
+        return output;
+    }
+
+    let mut sections = Vec::new();
+    if !output.trim().is_empty() {
+        sections.push(output);
+    }
+    let label = if denied {
+        "Hook feedback (denied)"
+    } else {
+        "Hook feedback"
+    };
+    sections.push(format!("{label}:\n{}", messages.join("\n")));
+    sections.join("\n\n")
+}
+
 type ToolHandler = Box<dyn FnMut(&str) -> Result<String, ToolError>>;
 
 #[derive(Default)]
@@ -329,6 +524,7 @@ mod tests {
         StaticToolExecutor,
     };
     use crate::compact::CompactionConfig;
+    use crate::config::{RuntimeFeatureConfig, RuntimeHookConfig};
     use crate::permissions::{
         PermissionMode, PermissionPolicy, PermissionPromptDecision, PermissionPrompter,
         PermissionRequest,
@@ -503,6 +699,143 @@ mod tests {
         ));
     }
 
+    #[test]
+    fn denies_tool_use_when_pre_tool_hook_blocks() {
+        struct SingleCallApiClient;
+        impl ApiClient for SingleCallApiClient {
+            fn stream(&mut self, request: ApiRequest) -> Result<Vec<AssistantEvent>, RuntimeError> {
+                if request
+                    .messages
+                    .iter()
+                    .any(|message| message.role == MessageRole::Tool)
+                {
+                    return Ok(vec![
+                        AssistantEvent::TextDelta("blocked".to_string()),
+                        AssistantEvent::MessageStop,
+                    ]);
+                }
+                Ok(vec![
+                    AssistantEvent::ToolUse {
+                        id: "tool-1".to_string(),
+                        name: "blocked".to_string(),
+                        input: r#"{"path":"secret.txt"}"#.to_string(),
+                    },
+                    AssistantEvent::MessageStop,
+                ])
+            }
+        }
+
+        let mut runtime = ConversationRuntime::new_with_features(
+            Session::new(),
+            SingleCallApiClient,
+            StaticToolExecutor::new().register("blocked", |_input| {
+                panic!("tool should not execute when hook denies")
+            }),
+            PermissionPolicy::new(PermissionMode::DangerFullAccess),
+            vec!["system".to_string()],
+            RuntimeFeatureConfig::default().with_hooks(RuntimeHookConfig::new(
+                vec![shell_snippet("printf 'blocked by hook'; exit 2")],
+                Vec::new(),
+                Vec::new(),
+            )),
+        );
+
+        let summary = runtime
+            .run_turn("use the tool", None)
+            .expect("conversation should continue after hook denial");
+
+        assert_eq!(summary.tool_results.len(), 1);
+        let ContentBlock::ToolResult {
+            is_error, output, ..
+        } = &summary.tool_results[0].blocks[0]
+        else {
+            panic!("expected tool result block");
+        };
+        assert!(
+            *is_error,
+            "hook denial should produce an error result: {output}"
+        );
+        assert!(
+            output.contains("denied tool") || output.contains("blocked by hook"),
+            "unexpected hook denial output: {output:?}"
+        );
+    }
+
+    #[test]
+    fn appends_post_tool_hook_feedback_to_tool_result() {
+        struct TwoCallApiClient {
+            calls: usize,
+        }
+
+        impl ApiClient for TwoCallApiClient {
+            fn stream(&mut self, request: ApiRequest) -> Result<Vec<AssistantEvent>, RuntimeError> {
+                self.calls += 1;
+                match self.calls {
+                    1 => Ok(vec![
+                        AssistantEvent::ToolUse {
+                            id: "tool-1".to_string(),
+                            name: "add".to_string(),
+                            input: r#"{"lhs":2,"rhs":2}"#.to_string(),
+                        },
+                        AssistantEvent::MessageStop,
+                    ]),
+                    2 => {
+                        assert!(request
+                            .messages
+                            .iter()
+                            .any(|message| message.role == MessageRole::Tool));
+                        Ok(vec![
+                            AssistantEvent::TextDelta("done".to_string()),
+                            AssistantEvent::MessageStop,
+                        ])
+                    }
+                    _ => Err(RuntimeError::new("unexpected extra API call")),
+                }
+            }
+        }
+
+        let mut runtime = ConversationRuntime::new_with_features(
+            Session::new(),
+            TwoCallApiClient { calls: 0 },
+            StaticToolExecutor::new().register("add", |_input| Ok("4".to_string())),
+            PermissionPolicy::new(PermissionMode::DangerFullAccess),
+            vec!["system".to_string()],
+            RuntimeFeatureConfig::default().with_hooks(RuntimeHookConfig::new(
+                vec![shell_snippet("printf 'pre hook ran'")],
+                vec![shell_snippet("printf 'post hook ran'")],
+                Vec::new(),
+            )),
+        );
+
+        let summary = runtime
+            .run_turn("use add", None)
+            .expect("tool loop succeeds");
+
+        assert_eq!(summary.tool_results.len(), 1);
+        let ContentBlock::ToolResult {
+            is_error, output, ..
+        } = &summary.tool_results[0].blocks[0]
+        else {
+            panic!("expected tool result block");
+        };
+        assert!(
+            !*is_error,
+            "post hook should preserve non-error result: {output:?}"
+        );
+        assert!(
+            output.contains('4'),
+            "tool output missing value: {output:?}"
+        );
+        assert!(
+            output.contains("pre hook ran"),
+            "tool output missing pre hook feedback: {output:?}"
+        );
+        assert!(
+            output.contains("post hook ran"),
+            "tool output missing post hook feedback: {output:?}"
+        );
+    }
+
     #[test]
     fn reconstructs_usage_tracker_from_restored_session() {
         struct SimpleApi;
@@ -581,4 +914,14 @@ mod tests {
             MessageRole::System
         );
     }
+
+    #[cfg(windows)]
+    fn shell_snippet(script: &str) -> String {
+        script.replace('\'', "\"")
+    }
+
+    #[cfg(not(windows))]
+    fn shell_snippet(script: &str) -> String {
+        script.to_string()
+    }
 }

rust/crates/runtime/src/hooks.rs

@@ -0,0 +1,853 @@
+use std::ffi::OsStr;
+use std::io::Write;
+use std::process::{Command, Stdio};
+use std::sync::{
+    atomic::{AtomicBool, Ordering},
+    Arc,
+};
+use std::thread;
+use std::time::Duration;
+
+use serde_json::{json, Value};
+
+use crate::config::{RuntimeFeatureConfig, RuntimeHookConfig};
+use crate::permissions::PermissionOverride;
+
+pub type HookPermissionDecision = PermissionOverride;
+
+#[derive(Debug, Clone, Copy, PartialEq, Eq)]
+pub enum HookEvent {
+    PreToolUse,
+    PostToolUse,
+    PostToolUseFailure,
+}
+
+impl HookEvent {
+    #[must_use]
+    pub fn as_str(self) -> &'static str {
+        match self {
+            Self::PreToolUse => "PreToolUse",
+            Self::PostToolUse => "PostToolUse",
+            Self::PostToolUseFailure => "PostToolUseFailure",
+        }
+    }
+}
+
+#[derive(Debug, Clone, PartialEq, Eq)]
+pub enum HookProgressEvent {
+    Started {
+        event: HookEvent,
+        tool_name: String,
+        command: String,
+    },
+    Completed {
+        event: HookEvent,
+        tool_name: String,
+        command: String,
+    },
+    Cancelled {
+        event: HookEvent,
+        tool_name: String,
+        command: String,
+    },
+}
+
+pub trait HookProgressReporter {
+    fn on_event(&mut self, event: &HookProgressEvent);
+}
+
+#[derive(Debug, Clone, Default)]
+pub struct HookAbortSignal {
+    aborted: Arc<AtomicBool>,
+}
+
+impl HookAbortSignal {
+    #[must_use]
+    pub fn new() -> Self {
+        Self::default()
+    }
+
+    pub fn abort(&self) {
+        self.aborted.store(true, Ordering::SeqCst);
+    }
+
+    #[must_use]
+    pub fn is_aborted(&self) -> bool {
+        self.aborted.load(Ordering::SeqCst)
+    }
+}
+
+#[derive(Debug, Clone, PartialEq, Eq)]
+pub struct HookRunResult {
+    denied: bool,
+    cancelled: bool,
+    messages: Vec<String>,
+    permission_override: Option<PermissionOverride>,
+    permission_reason: Option<String>,
+    updated_input: Option<String>,
+}
+
+impl HookRunResult {
+    #[must_use]
+    pub fn allow(messages: Vec<String>) -> Self {
+        Self {
+            denied: false,
+            cancelled: false,
+            messages,
+            permission_override: None,
+            permission_reason: None,
+            updated_input: None,
+        }
+    }
+
+    #[must_use]
+    pub fn is_denied(&self) -> bool {
+        self.denied
+    }
+
+    #[must_use]
+    pub fn is_cancelled(&self) -> bool {
+        self.cancelled
+    }
+
+    #[must_use]
+    pub fn messages(&self) -> &[String] {
+        &self.messages
+    }
+
+    #[must_use]
+    pub fn permission_override(&self) -> Option<PermissionOverride> {
+        self.permission_override
+    }
+
+    #[must_use]
+    pub fn permission_decision(&self) -> Option<HookPermissionDecision> {
+        self.permission_override
+    }
+
+    #[must_use]
+    pub fn permission_reason(&self) -> Option<&str> {
+        self.permission_reason.as_deref()
+    }
+
+    #[must_use]
+    pub fn updated_input(&self) -> Option<&str> {
+        self.updated_input.as_deref()
+    }
+
+    #[must_use]
+    pub fn updated_input_json(&self) -> Option<&str> {
+        self.updated_input()
+    }
+}
+
+#[derive(Debug, Clone, PartialEq, Eq, Default)]
+pub struct HookRunner {
+    config: RuntimeHookConfig,
+}
+
+impl HookRunner {
+    #[must_use]
+    pub fn new(config: RuntimeHookConfig) -> Self {
+        Self { config }
+    }
+
+    #[must_use]
+    pub fn from_feature_config(feature_config: &RuntimeFeatureConfig) -> Self {
+        Self::new(feature_config.hooks().clone())
+    }
+
+    #[must_use]
+    pub fn run_pre_tool_use(&self, tool_name: &str, tool_input: &str) -> HookRunResult {
+        self.run_pre_tool_use_with_context(tool_name, tool_input, None, None)
+    }
+
+    #[must_use]
+    pub fn run_pre_tool_use_with_context(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        abort_signal: Option<&HookAbortSignal>,
+        reporter: Option<&mut dyn HookProgressReporter>,
+    ) -> HookRunResult {
+        Self::run_commands(
+            HookEvent::PreToolUse,
+            self.config.pre_tool_use(),
+            tool_name,
+            tool_input,
+            None,
+            false,
+            abort_signal,
+            reporter,
+        )
+    }
+
+    #[must_use]
+    pub fn run_pre_tool_use_with_signal(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        abort_signal: Option<&HookAbortSignal>,
+    ) -> HookRunResult {
+        self.run_pre_tool_use_with_context(tool_name, tool_input, abort_signal, None)
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_output: &str,
+        is_error: bool,
+    ) -> HookRunResult {
+        self.run_post_tool_use_with_context(
+            tool_name,
+            tool_input,
+            tool_output,
+            is_error,
+            None,
+            None,
+        )
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use_with_context(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_output: &str,
+        is_error: bool,
+        abort_signal: Option<&HookAbortSignal>,
+        reporter: Option<&mut dyn HookProgressReporter>,
+    ) -> HookRunResult {
+        Self::run_commands(
+            HookEvent::PostToolUse,
+            self.config.post_tool_use(),
+            tool_name,
+            tool_input,
+            Some(tool_output),
+            is_error,
+            abort_signal,
+            reporter,
+        )
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use_with_signal(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_output: &str,
+        is_error: bool,
+        abort_signal: Option<&HookAbortSignal>,
+    ) -> HookRunResult {
+        self.run_post_tool_use_with_context(
+            tool_name,
+            tool_input,
+            tool_output,
+            is_error,
+            abort_signal,
+            None,
+        )
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use_failure(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_error: &str,
+    ) -> HookRunResult {
+        self.run_post_tool_use_failure_with_context(tool_name, tool_input, tool_error, None, None)
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use_failure_with_context(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_error: &str,
+        abort_signal: Option<&HookAbortSignal>,
+        reporter: Option<&mut dyn HookProgressReporter>,
+    ) -> HookRunResult {
+        Self::run_commands(
+            HookEvent::PostToolUseFailure,
+            self.config.post_tool_use_failure(),
+            tool_name,
+            tool_input,
+            Some(tool_error),
+            true,
+            abort_signal,
+            reporter,
+        )
+    }
+
+    #[must_use]
+    pub fn run_post_tool_use_failure_with_signal(
+        &self,
+        tool_name: &str,
+        tool_input: &str,
+        tool_error: &str,
+        abort_signal: Option<&HookAbortSignal>,
+    ) -> HookRunResult {
+        self.run_post_tool_use_failure_with_context(
+            tool_name,
+            tool_input,
+            tool_error,
+            abort_signal,
+            None,
+        )
+    }
+
+    #[allow(clippy::too_many_arguments)]
+    fn run_commands(
+        event: HookEvent,
+        commands: &[String],
+        tool_name: &str,
+        tool_input: &str,
+        tool_output: Option<&str>,
+        is_error: bool,
+        abort_signal: Option<&HookAbortSignal>,
+        mut reporter: Option<&mut dyn HookProgressReporter>,
+    ) -> HookRunResult {
+        if commands.is_empty() {
+            return HookRunResult::allow(Vec::new());
+        }
+
+        if abort_signal.is_some_and(HookAbortSignal::is_aborted) {
+            return HookRunResult {
+                denied: false,
+                cancelled: true,
+                messages: vec![format!(
+                    "{} hook cancelled before execution",
+                    event.as_str()
+                )],
+                permission_override: None,
+                permission_reason: None,
+                updated_input: None,
+            };
+        }
+
+        let payload = hook_payload(event, tool_name, tool_input, tool_output, is_error).to_string();
+        let mut result = HookRunResult::allow(Vec::new());
+
+        for command in commands {
+            if let Some(reporter) = reporter.as_deref_mut() {
+                reporter.on_event(&HookProgressEvent::Started {
+                    event,
+                    tool_name: tool_name.to_string(),
+                    command: command.clone(),
+                });
+            }
+
+            match Self::run_command(
+                command,
+                event,
+                tool_name,
+                tool_input,
+                tool_output,
+                is_error,
+                &payload,
+                abort_signal,
+            ) {
+                HookCommandOutcome::Allow { parsed } => {
+                    if let Some(reporter) = reporter.as_deref_mut() {
+                        reporter.on_event(&HookProgressEvent::Completed {
+                            event,
+                            tool_name: tool_name.to_string(),
+                            command: command.clone(),
+                        });
+                    }
+                    merge_parsed_hook_output(&mut result, parsed);
+                }
+                HookCommandOutcome::Deny { parsed } => {
+                    if let Some(reporter) = reporter.as_deref_mut() {
+                        reporter.on_event(&HookProgressEvent::Completed {
+                            event,
+                            tool_name: tool_name.to_string(),
+                            command: command.clone(),
+                        });
+                    }
+                    merge_parsed_hook_output(&mut result, parsed);
+                    result.denied = true;
+                    return result;
+                }
+                HookCommandOutcome::Warn { message } => {
+                    if let Some(reporter) = reporter.as_deref_mut() {
+                        reporter.on_event(&HookProgressEvent::Completed {
+                            event,
+                            tool_name: tool_name.to_string(),
+                            command: command.clone(),
+                        });
+                    }
+                    result.messages.push(message);
+                }
+                HookCommandOutcome::Cancelled { message } => {
+                    if let Some(reporter) = reporter.as_deref_mut() {
+                        reporter.on_event(&HookProgressEvent::Cancelled {
+                            event,
+                            tool_name: tool_name.to_string(),
+                            command: command.clone(),
+                        });
+                    }
+                    result.cancelled = true;
+                    result.messages.push(message);
+                    return result;
+                }
+            }
+        }
+
+        result
+    }
+
+    #[allow(clippy::too_many_arguments)]
+    fn run_command(
+        command: &str,
+        event: HookEvent,
+        tool_name: &str,
+        tool_input: &str,
+        tool_output: Option<&str>,
+        is_error: bool,
+        payload: &str,
+        abort_signal: Option<&HookAbortSignal>,
+    ) -> HookCommandOutcome {
+        let mut child = shell_command(command);
+        child.stdin(Stdio::piped());
+        child.stdout(Stdio::piped());
+        child.stderr(Stdio::piped());
+        child.env("HOOK_EVENT", event.as_str());
+        child.env("HOOK_TOOL_NAME", tool_name);
+        child.env("HOOK_TOOL_INPUT", tool_input);
+        child.env("HOOK_TOOL_IS_ERROR", if is_error { "1" } else { "0" });
+        if let Some(tool_output) = tool_output {
+            child.env("HOOK_TOOL_OUTPUT", tool_output);
+        }
+
+        match child.output_with_stdin(payload.as_bytes(), abort_signal) {
+            Ok(CommandExecution::Finished(output)) => {
+                let stdout = String::from_utf8_lossy(&output.stdout).trim().to_string();
+                let stderr = String::from_utf8_lossy(&output.stderr).trim().to_string();
+                let parsed = parse_hook_output(&stdout);
+                match output.status.code() {
+                    Some(0) => {
+                        if parsed.deny {
+                            HookCommandOutcome::Deny { parsed }
+                        } else {
+                            HookCommandOutcome::Allow { parsed }
+                        }
+                    }
+                    Some(2) => HookCommandOutcome::Deny {
+                        parsed: parsed.with_fallback_message(format!(
+                            "{} hook denied tool `{tool_name}`",
+                            event.as_str()
+                        )),
+                    },
+                    Some(code) => HookCommandOutcome::Warn {
+                        message: format_hook_warning(
+                            command,
+                            code,
+                            parsed.primary_message(),
+                            stderr.as_str(),
+                        ),
+                    },
+                    None => HookCommandOutcome::Warn {
+                        message: format!(
+                            "{} hook `{command}` terminated by signal while handling `{tool_name}`",
+                            event.as_str()
+                        ),
+                    },
+                }
+            }
+            Ok(CommandExecution::Cancelled) => HookCommandOutcome::Cancelled {
+                message: format!(
+                    "{} hook `{command}` cancelled while handling `{tool_name}`",
+                    event.as_str()
+                ),
+            },
+            Err(error) => HookCommandOutcome::Warn {
+                message: format!(
+                    "{} hook `{command}` failed to start for `{tool_name}`: {error}",
+                    event.as_str()
+                ),
+            },
+        }
+    }
+}
+
+enum HookCommandOutcome {
+    Allow { parsed: ParsedHookOutput },
+    Deny { parsed: ParsedHookOutput },
+    Warn { message: String },
+    Cancelled { message: String },
+}
+
+#[derive(Debug, Clone, PartialEq, Eq, Default)]
+struct ParsedHookOutput {
+    messages: Vec<String>,
+    deny: bool,
+    permission_override: Option<PermissionOverride>,
+    permission_reason: Option<String>,
+    updated_input: Option<String>,
+}
+
+impl ParsedHookOutput {
+    fn with_fallback_message(mut self, fallback: String) -> Self {
+        if self.messages.is_empty() {
+            self.messages.push(fallback);
+        }
+        self
+    }
+
+    fn primary_message(&self) -> Option<&str> {
+        self.messages.first().map(String::as_str)
+    }
+}
+
+fn merge_parsed_hook_output(target: &mut HookRunResult, parsed: ParsedHookOutput) {
+    target.messages.extend(parsed.messages);
+    if parsed.permission_override.is_some() {
+        target.permission_override = parsed.permission_override;
+    }
+    if parsed.permission_reason.is_some() {
+        target.permission_reason = parsed.permission_reason;
+    }
+    if parsed.updated_input.is_some() {
+        target.updated_input = parsed.updated_input;
+    }
+}
+
+fn parse_hook_output(stdout: &str) -> ParsedHookOutput {
+    if stdout.is_empty() {
+        return ParsedHookOutput::default();
+    }
+
+    let Ok(Value::Object(root)) = serde_json::from_str::<Value>(stdout) else {
+        return ParsedHookOutput {
+            messages: vec![stdout.to_string()],
+            ..ParsedHookOutput::default()
+        };
+    };
+
+    let mut parsed = ParsedHookOutput::default();
+
+    if let Some(message) = root.get("systemMessage").and_then(Value::as_str) {
+        parsed.messages.push(message.to_string());
+    }
+    if let Some(message) = root.get("reason").and_then(Value::as_str) {
+        parsed.messages.push(message.to_string());
+    }
+    if root.get("continue").and_then(Value::as_bool) == Some(false)
+        || root.get("decision").and_then(Value::as_str) == Some("block")
+    {
+        parsed.deny = true;
+    }
+
+    if let Some(Value::Object(specific)) = root.get("hookSpecificOutput") {
+        if let Some(Value::String(additional_context)) = specific.get("additionalContext") {
+            parsed.messages.push(additional_context.clone());
+        }
+        if let Some(decision) = specific.get("permissionDecision").and_then(Value::as_str) {
+            parsed.permission_override = match decision {
+                "allow" => Some(PermissionOverride::Allow),
+                "deny" => Some(PermissionOverride::Deny),
+                "ask" => Some(PermissionOverride::Ask),
+                _ => None,
+            };
+        }
+        if let Some(reason) = specific
+            .get("permissionDecisionReason")
+            .and_then(Value::as_str)
+        {
+            parsed.permission_reason = Some(reason.to_string());
+        }
+        if let Some(updated_input) = specific.get("updatedInput") {
+            parsed.updated_input = serde_json::to_string(updated_input).ok();
+        }
+    }
+
+    if parsed.messages.is_empty() {
+        parsed.messages.push(stdout.to_string());
+    }
+
+    parsed
+}
+
+fn hook_payload(
+    event: HookEvent,
+    tool_name: &str,
+    tool_input: &str,
+    tool_output: Option<&str>,
+    is_error: bool,
+) -> Value {
+    match event {
+        HookEvent::PostToolUseFailure => json!({
+            "hook_event_name": event.as_str(),
+            "tool_name": tool_name,
+            "tool_input": parse_tool_input(tool_input),
+            "tool_input_json": tool_input,
+            "tool_error": tool_output,
+            "tool_result_is_error": true,
+        }),
+        _ => json!({
+            "hook_event_name": event.as_str(),
+            "tool_name": tool_name,
+            "tool_input": parse_tool_input(tool_input),
+            "tool_input_json": tool_input,
+            "tool_output": tool_output,
+            "tool_result_is_error": is_error,
+        }),
+    }
+}
+
+fn parse_tool_input(tool_input: &str) -> Value {
+    serde_json::from_str(tool_input).unwrap_or_else(|_| json!({ "raw": tool_input }))
+}
+
+fn format_hook_warning(command: &str, code: i32, stdout: Option<&str>, stderr: &str) -> String {
+    let mut message =
+        format!("Hook `{command}` exited with status {code}; allowing tool execution to continue");
+    if let Some(stdout) = stdout.filter(|stdout| !stdout.is_empty()) {
+        message.push_str(": ");
+        message.push_str(stdout);
+    } else if !stderr.is_empty() {
+        message.push_str(": ");
+        message.push_str(stderr);
+    }
+    message
+}
+
+fn shell_command(command: &str) -> CommandWithStdin {
+    #[cfg(windows)]
+    let mut command_builder = {
+        let mut command_builder = Command::new("cmd");
+        command_builder.arg("/C").arg(command);
+        CommandWithStdin::new(command_builder)
+    };
+
+    #[cfg(not(windows))]
+    let command_builder = {
+        let mut command_builder = Command::new("sh");
+        command_builder.arg("-lc").arg(command);
+        CommandWithStdin::new(command_builder)
+    };
+
+    command_builder
+}
+
+struct CommandWithStdin {
+    command: Command,
+}
+
+impl CommandWithStdin {
+    fn new(command: Command) -> Self {
+        Self { command }
+    }
+
+    fn stdin(&mut self, cfg: Stdio) -> &mut Self {
+        self.command.stdin(cfg);
+        self
+    }
+
+    fn stdout(&mut self, cfg: Stdio) -> &mut Self {
+        self.command.stdout(cfg);
+        self
+    }
+
+    fn stderr(&mut self, cfg: Stdio) -> &mut Self {
+        self.command.stderr(cfg);
+        self
+    }
+
+    fn env<K, V>(&mut self, key: K, value: V) -> &mut Self
+    where
+        K: AsRef<OsStr>,
+        V: AsRef<OsStr>,
+    {
+        self.command.env(key, value);
+        self
+    }
+
+    fn output_with_stdin(
+        &mut self,
+        stdin: &[u8],
+        abort_signal: Option<&HookAbortSignal>,
+    ) -> std::io::Result<CommandExecution> {
+        let mut child = self.command.spawn()?;
+        if let Some(mut child_stdin) = child.stdin.take() {
+            child_stdin.write_all(stdin)?;
+        }
+
+        loop {
+            if abort_signal.is_some_and(HookAbortSignal::is_aborted) {
+                let _ = child.kill();
+                let _ = child.wait_with_output();
+                return Ok(CommandExecution::Cancelled);
+            }
+
+            match child.try_wait()? {
+                Some(_) => return child.wait_with_output().map(CommandExecution::Finished),
+                None => thread::sleep(Duration::from_millis(20)),
+            }
+        }
+    }
+}
+
+enum CommandExecution {
+    Finished(std::process::Output),
+    Cancelled,
+}
+
+#[cfg(test)]
+mod tests {
+    use std::thread;
+    use std::time::Duration;
+
+    use super::{
+        HookAbortSignal, HookEvent, HookProgressEvent, HookProgressReporter, HookRunResult,
+        HookRunner,
+    };
+    use crate::config::{RuntimeFeatureConfig, RuntimeHookConfig};
+    use crate::permissions::PermissionOverride;
+
+    struct RecordingReporter {
+        events: Vec<HookProgressEvent>,
+    }
+
+    impl HookProgressReporter for RecordingReporter {
+        fn on_event(&mut self, event: &HookProgressEvent) {
+            self.events.push(event.clone());
+        }
+    }
+
+    #[test]
+    fn allows_exit_code_zero_and_captures_stdout() {
+        let runner = HookRunner::new(RuntimeHookConfig::new(
+            vec![shell_snippet("printf 'pre ok'")],
+            Vec::new(),
+            Vec::new(),
+        ));
+
+        let result = runner.run_pre_tool_use("Read", r#"{"path":"README.md"}"#);
+
+        assert_eq!(result, HookRunResult::allow(vec!["pre ok".to_string()]));
+    }
+
+    #[test]
+    fn denies_exit_code_two() {
+        let runner = HookRunner::new(RuntimeHookConfig::new(
+            vec![shell_snippet("printf 'blocked by hook'; exit 2")],
+            Vec::new(),
+            Vec::new(),
+        ));
+
+        let result = runner.run_pre_tool_use("Bash", r#"{"command":"pwd"}"#);
+
+        assert!(result.is_denied());
+        assert_eq!(result.messages(), &["blocked by hook".to_string()]);
+    }
+
+    #[test]
+    fn warns_for_other_non_zero_statuses() {
+        let runner = HookRunner::from_feature_config(&RuntimeFeatureConfig::default().with_hooks(
+            RuntimeHookConfig::new(
+                vec![shell_snippet("printf 'warning hook'; exit 1")],
+                Vec::new(),
+                Vec::new(),
+            ),
+        ));
+
+        let result = runner.run_pre_tool_use("Edit", r#"{"file":"src/lib.rs"}"#);
+
+        assert!(!result.is_denied());
+        assert!(result
+            .messages()
+            .iter()
+            .any(|message| message.contains("allowing tool execution to continue")));
+    }
+
+    #[test]
+    fn parses_pre_hook_permission_override_and_updated_input() {
+        let runner = HookRunner::new(RuntimeHookConfig::new(
+            vec![shell_snippet(
+                r#"printf '%s' '{"systemMessage":"updated","hookSpecificOutput":{"permissionDecision":"allow","permissionDecisionReason":"hook ok","updatedInput":{"command":"git status"}}}'"#,
+            )],
+            Vec::new(),
+            Vec::new(),
+        ));
+
+        let result = runner.run_pre_tool_use("bash", r#"{"command":"pwd"}"#);
+
+        assert_eq!(
+            result.permission_override(),
+            Some(PermissionOverride::Allow)
+        );
+        assert_eq!(result.permission_reason(), Some("hook ok"));
+        assert_eq!(result.updated_input(), Some(r#"{"command":"git status"}"#));
+        assert!(result.messages().iter().any(|message| message == "updated"));
+    }
+
+    #[test]
+    fn runs_post_tool_use_failure_hooks() {
+        let runner = HookRunner::new(RuntimeHookConfig::new(
+            Vec::new(),
+            Vec::new(),
+            vec![shell_snippet("printf 'failure hook ran'")],
+        ));
+
+        let result =
+            runner.run_post_tool_use_failure("bash", r#"{"command":"false"}"#, "command failed");
+
+        assert!(!result.is_denied());
+        assert_eq!(result.messages(), &["failure hook ran".to_string()]);
+    }
+
+    #[test]
+    fn abort_signal_cancels_long_running_hook_and_reports_progress() {
+        let runner = HookRunner::new(RuntimeHookConfig::new(
+            vec![shell_snippet("sleep 5")],
+            Vec::new(),
+            Vec::new(),
+        ));
+        let abort_signal = HookAbortSignal::new();
+        let abort_signal_for_thread = abort_signal.clone();
+        let mut reporter = RecordingReporter { events: Vec::new() };
+
+        thread::spawn(move || {
+            thread::sleep(Duration::from_millis(100));
+            abort_signal_for_thread.abort();
+        });
+
+        let result = runner.run_pre_tool_use_with_context(
+            "bash",
+            r#"{"command":"sleep 5"}"#,
+            Some(&abort_signal),
+            Some(&mut reporter),
+        );
+
+        assert!(result.is_cancelled());
+        assert!(reporter.events.iter().any(|event| matches!(
+            event,
+            HookProgressEvent::Started {
+                event: HookEvent::PreToolUse,
+                ..
+            }
+        )));
+        assert!(reporter.events.iter().any(|event| matches!(
+            event,
+            HookProgressEvent::Cancelled {
+                event: HookEvent::PreToolUse,
+                ..
+            }
+        )));
+    }
+
+    #[cfg(windows)]
+    fn shell_snippet(script: &str) -> String {
+        script.replace('\'', "\"")
+    }
+
+    #[cfg(not(windows))]
+    fn shell_snippet(script: &str) -> String {
+        script.to_string()
+    }
+}

rust/crates/runtime/src/lib.rs

@@ -4,6 +4,7 @@ mod compact;
 mod config;
 mod conversation;
 mod file_ops;
+mod hooks;
 mod json;
 mod mcp;
 mod mcp_client;
@@ -26,8 +27,8 @@ pub use config::{
     ConfigEntry, ConfigError, ConfigLoader, ConfigSource, McpClaudeAiProxyServerConfig,
     McpConfigCollection, McpOAuthConfig, McpRemoteServerConfig, McpSdkServerConfig,
     McpServerConfig, McpStdioServerConfig, McpTransport, McpWebSocketServerConfig, OAuthConfig,
-    ResolvedPermissionMode, RuntimeConfig, RuntimeFeatureConfig, ScopedMcpServerConfig,
-    CLAUDE_CODE_SETTINGS_SCHEMA_NAME,
+    ResolvedPermissionMode, RuntimeConfig, RuntimeFeatureConfig, RuntimeHookConfig,
+    RuntimePermissionRuleConfig, ScopedMcpServerConfig, CLAUDE_CODE_SETTINGS_SCHEMA_NAME,
 };
 pub use conversation::{
     ApiClient, ApiRequest, AssistantEvent, ConversationRuntime, RuntimeError, StaticToolExecutor,
@@ -38,6 +39,9 @@ pub use file_ops::{
     GrepSearchInput, GrepSearchOutput, ReadFileOutput, StructuredPatchHunk, TextFilePayload,
     WriteFileOutput,
 };
+pub use hooks::{
+    HookAbortSignal, HookEvent, HookProgressEvent, HookProgressReporter, HookRunResult, HookRunner,
+};
 pub use mcp::{
     mcp_server_signature, mcp_tool_name, mcp_tool_prefix, normalize_name_for_mcp,
     scoped_mcp_config_hash, unwrap_ccr_proxy_url,
@@ -62,8 +66,8 @@ pub use oauth::{
     PkceChallengeMethod, PkceCodePair,
 };
 pub use permissions::{
-    PermissionMode, PermissionOutcome, PermissionPolicy, PermissionPromptDecision,
-    PermissionPrompter, PermissionRequest,
+    PermissionContext, PermissionMode, PermissionOutcome, PermissionOverride, PermissionPolicy,
+    PermissionPromptDecision, PermissionPrompter, PermissionRequest,
 };
 pub use prompt::{
     load_system_prompt, prepend_bullets, ContextFile, ProjectContext, PromptBuildError,

rust/crates/runtime/src/permissions.rs

@@ -1,5 +1,9 @@
 use std::collections::BTreeMap;
 
+use serde_json::Value;
+
+use crate::config::RuntimePermissionRuleConfig;
+
 #[derive(Debug, Clone, Copy, PartialEq, Eq, PartialOrd, Ord)]
 pub enum PermissionMode {
     ReadOnly,
@@ -22,12 +26,49 @@ impl PermissionMode {
     }
 }
 
+#[derive(Debug, Clone, Copy, PartialEq, Eq)]
+pub enum PermissionOverride {
+    Allow,
+    Deny,
+    Ask,
+}
+
+#[derive(Debug, Clone, PartialEq, Eq, Default)]
+pub struct PermissionContext {
+    override_decision: Option<PermissionOverride>,
+    override_reason: Option<String>,
+}
+
+impl PermissionContext {
+    #[must_use]
+    pub fn new(
+        override_decision: Option<PermissionOverride>,
+        override_reason: Option<String>,
+    ) -> Self {
+        Self {
+            override_decision,
+            override_reason,
+        }
+    }
+
+    #[must_use]
+    pub fn override_decision(&self) -> Option<PermissionOverride> {
+        self.override_decision
+    }
+
+    #[must_use]
+    pub fn override_reason(&self) -> Option<&str> {
+        self.override_reason.as_deref()
+    }
+}
+
 #[derive(Debug, Clone, PartialEq, Eq)]
 pub struct PermissionRequest {
     pub tool_name: String,
     pub input: String,
     pub current_mode: PermissionMode,
     pub required_mode: PermissionMode,
+    pub reason: Option<String>,
 }
 
 #[derive(Debug, Clone, PartialEq, Eq)]
@@ -50,6 +91,9 @@ pub enum PermissionOutcome {
 pub struct PermissionPolicy {
     active_mode: PermissionMode,
     tool_requirements: BTreeMap<String, PermissionMode>,
+    allow_rules: Vec<PermissionRule>,
+    deny_rules: Vec<PermissionRule>,
+    ask_rules: Vec<PermissionRule>,
 }
 
 impl PermissionPolicy {
@@ -58,6 +102,9 @@ impl PermissionPolicy {
         Self {
             active_mode,
             tool_requirements: BTreeMap::new(),
+            allow_rules: Vec::new(),
+            deny_rules: Vec::new(),
+            ask_rules: Vec::new(),
         }
     }
 
@@ -72,6 +119,26 @@ impl PermissionPolicy {
         self
     }
 
+    #[must_use]
+    pub fn with_permission_rules(mut self, config: &RuntimePermissionRuleConfig) -> Self {
+        self.allow_rules = config
+            .allow()
+            .iter()
+            .map(|rule| PermissionRule::parse(rule))
+            .collect();
+        self.deny_rules = config
+            .deny()
+            .iter()
+            .map(|rule| PermissionRule::parse(rule))
+            .collect();
+        self.ask_rules = config
+            .ask()
+            .iter()
+            .map(|rule| PermissionRule::parse(rule))
+            .collect();
+        self
+    }
+
     #[must_use]
     pub fn active_mode(&self) -> PermissionMode {
         self.active_mode
@@ -90,38 +157,121 @@ impl PermissionPolicy {
         &self,
         tool_name: &str,
         input: &str,
-        mut prompter: Option<&mut dyn PermissionPrompter>,
+        prompter: Option<&mut dyn PermissionPrompter>,
     ) -> PermissionOutcome {
-        let current_mode = self.active_mode();
-        let required_mode = self.required_mode_for(tool_name);
-        if current_mode == PermissionMode::Allow || current_mode >= required_mode {
-            return PermissionOutcome::Allow;
+        self.authorize_with_context(tool_name, input, &PermissionContext::default(), prompter)
+    }
+
+    #[must_use]
+    #[allow(clippy::too_many_lines)]
+    pub fn authorize_with_context(
+        &self,
+        tool_name: &str,
+        input: &str,
+        context: &PermissionContext,
+        prompter: Option<&mut dyn PermissionPrompter>,
+    ) -> PermissionOutcome {
+        if let Some(rule) = Self::find_matching_rule(&self.deny_rules, tool_name, input) {
+            return PermissionOutcome::Deny {
+                reason: format!(
+                    "Permission to use {tool_name} has been denied by rule '{}'",
+                    rule.raw
+                ),
+            };
         }
 
-        let request = PermissionRequest {
-            tool_name: tool_name.to_string(),
-            input: input.to_string(),
-            current_mode,
-            required_mode,
-        };
+        let current_mode = self.active_mode();
+        let required_mode = self.required_mode_for(tool_name);
+        let ask_rule = Self::find_matching_rule(&self.ask_rules, tool_name, input);
+        let allow_rule = Self::find_matching_rule(&self.allow_rules, tool_name, input);
+
+        match context.override_decision() {
+            Some(PermissionOverride::Deny) => {
+                return PermissionOutcome::Deny {
+                    reason: context.override_reason().map_or_else(
+                        || format!("tool '{tool_name}' denied by hook"),
+                        ToOwned::to_owned,
+                    ),
+                };
+            }
+            Some(PermissionOverride::Ask) => {
+                let reason = context.override_reason().map_or_else(
+                    || format!("tool '{tool_name}' requires approval due to hook guidance"),
+                    ToOwned::to_owned,
+                );
+                return Self::prompt_or_deny(
+                    tool_name,
+                    input,
+                    current_mode,
+                    required_mode,
+                    Some(reason),
+                    prompter,
+                );
+            }
+            Some(PermissionOverride::Allow) => {
+                if let Some(rule) = ask_rule {
+                    let reason = format!(
+                        "tool '{tool_name}' requires approval due to ask rule '{}'",
+                        rule.raw
+                    );
+                    return Self::prompt_or_deny(
+                        tool_name,
+                        input,
+                        current_mode,
+                        required_mode,
+                        Some(reason),
+                        prompter,
+                    );
+                }
+                if allow_rule.is_some()
+                    || current_mode == PermissionMode::Allow
+                    || current_mode >= required_mode
+                {
+                    return PermissionOutcome::Allow;
+                }
+            }
+            None => {}
+        }
+
+        if let Some(rule) = ask_rule {
+            let reason = format!(
+                "tool '{tool_name}' requires approval due to ask rule '{}'",
+                rule.raw
+            );
+            return Self::prompt_or_deny(
+                tool_name,
+                input,
+                current_mode,
+                required_mode,
+                Some(reason),
+                prompter,
+            );
+        }
+
+        if allow_rule.is_some()
+            || current_mode == PermissionMode::Allow
+            || current_mode >= required_mode
+        {
+            return PermissionOutcome::Allow;
+        }
 
         if current_mode == PermissionMode::Prompt
             || (current_mode == PermissionMode::WorkspaceWrite
                 && required_mode == PermissionMode::DangerFullAccess)
         {
-            return match prompter.as_mut() {
-                Some(prompter) => match prompter.decide(&request) {
-                    PermissionPromptDecision::Allow => PermissionOutcome::Allow,
-                    PermissionPromptDecision::Deny { reason } => PermissionOutcome::Deny { reason },
-                },
-                None => PermissionOutcome::Deny {
-                    reason: format!(
-                        "tool '{tool_name}' requires approval to escalate from {} to {}",
-                        current_mode.as_str(),
-                        required_mode.as_str()
-                    ),
-                },
-            };
+            let reason = Some(format!(
+                "tool '{tool_name}' requires approval to escalate from {} to {}",
+                current_mode.as_str(),
+                required_mode.as_str()
+            ));
+            return Self::prompt_or_deny(
+                tool_name,
+                input,
+                current_mode,
+                required_mode,
+                reason,
+                prompter,
+            );
         }
 
         PermissionOutcome::Deny {
@@ -132,14 +282,191 @@ impl PermissionPolicy {
             ),
         }
     }
+
+    fn prompt_or_deny(
+        tool_name: &str,
+        input: &str,
+        current_mode: PermissionMode,
+        required_mode: PermissionMode,
+        reason: Option<String>,
+        mut prompter: Option<&mut dyn PermissionPrompter>,
+    ) -> PermissionOutcome {
+        let request = PermissionRequest {
+            tool_name: tool_name.to_string(),
+            input: input.to_string(),
+            current_mode,
+            required_mode,
+            reason: reason.clone(),
+        };
+
+        match prompter.as_mut() {
+            Some(prompter) => match prompter.decide(&request) {
+                PermissionPromptDecision::Allow => PermissionOutcome::Allow,
+                PermissionPromptDecision::Deny { reason } => PermissionOutcome::Deny { reason },
+            },
+            None => PermissionOutcome::Deny {
+                reason: reason.unwrap_or_else(|| {
+                    format!(
+                        "tool '{tool_name}' requires approval to run while mode is {}",
+                        current_mode.as_str()
+                    )
+                }),
+            },
+        }
+    }
+
+    fn find_matching_rule<'a>(
+        rules: &'a [PermissionRule],
+        tool_name: &str,
+        input: &str,
+    ) -> Option<&'a PermissionRule> {
+        rules.iter().find(|rule| rule.matches(tool_name, input))
+    }
+}
+
+#[derive(Debug, Clone, PartialEq, Eq)]
+struct PermissionRule {
+    raw: String,
+    tool_name: String,
+    matcher: PermissionRuleMatcher,
+}
+
+#[derive(Debug, Clone, PartialEq, Eq)]
+enum PermissionRuleMatcher {
+    Any,
+    Exact(String),
+    Prefix(String),
+}
+
+impl PermissionRule {
+    fn parse(raw: &str) -> Self {
+        let trimmed = raw.trim();
+        let open = find_first_unescaped(trimmed, '(');
+        let close = find_last_unescaped(trimmed, ')');
+
+        if let (Some(open), Some(close)) = (open, close) {
+            if close == trimmed.len() - 1 && open < close {
+                let tool_name = trimmed[..open].trim();
+                let content = &trimmed[open + 1..close];
+                if !tool_name.is_empty() {
+                    let matcher = parse_rule_matcher(content);
+                    return Self {
+                        raw: trimmed.to_string(),
+                        tool_name: tool_name.to_string(),
+                        matcher,
+                    };
+                }
+            }
+        }
+
+        Self {
+            raw: trimmed.to_string(),
+            tool_name: trimmed.to_string(),
+            matcher: PermissionRuleMatcher::Any,
+        }
+    }
+
+    fn matches(&self, tool_name: &str, input: &str) -> bool {
+        if self.tool_name != tool_name {
+            return false;
+        }
+
+        match &self.matcher {
+            PermissionRuleMatcher::Any => true,
+            PermissionRuleMatcher::Exact(expected) => {
+                extract_permission_subject(input).is_some_and(|candidate| candidate == *expected)
+            }
+            PermissionRuleMatcher::Prefix(prefix) => extract_permission_subject(input)
+                .is_some_and(|candidate| candidate.starts_with(prefix)),
+        }
+    }
+}
+
+fn parse_rule_matcher(content: &str) -> PermissionRuleMatcher {
+    let unescaped = unescape_rule_content(content.trim());
+    if unescaped.is_empty() || unescaped == "*" {
+        PermissionRuleMatcher::Any
+    } else if let Some(prefix) = unescaped.strip_suffix(":*") {
+        PermissionRuleMatcher::Prefix(prefix.to_string())
+    } else {
+        PermissionRuleMatcher::Exact(unescaped)
+    }
+}
+
+fn unescape_rule_content(content: &str) -> String {
+    content
+        .replace(r"\(", "(")
+        .replace(r"\)", ")")
+        .replace(r"\\", r"\")
+}
+
+fn find_first_unescaped(value: &str, needle: char) -> Option<usize> {
+    let mut escaped = false;
+    for (idx, ch) in value.char_indices() {
+        if ch == '\\' {
+            escaped = !escaped;
+            continue;
+        }
+        if ch == needle && !escaped {
+            return Some(idx);
+        }
+        escaped = false;
+    }
+    None
+}
+
+fn find_last_unescaped(value: &str, needle: char) -> Option<usize> {
+    let chars = value.char_indices().collect::<Vec<_>>();
+    for (pos, (idx, ch)) in chars.iter().enumerate().rev() {
+        if *ch != needle {
+            continue;
+        }
+        let mut backslashes = 0;
+        for (_, prev) in chars[..pos].iter().rev() {
+            if *prev == '\\' {
+                backslashes += 1;
+            } else {
+                break;
+            }
+        }
+        if backslashes % 2 == 0 {
+            return Some(*idx);
+        }
+    }
+    None
+}
+
+fn extract_permission_subject(input: &str) -> Option<String> {
+    let parsed = serde_json::from_str::<Value>(input).ok();
+    if let Some(Value::Object(object)) = parsed {
+        for key in [
+            "command",
+            "path",
+            "file_path",
+            "filePath",
+            "notebook_path",
+            "notebookPath",
+            "url",
+            "pattern",
+            "code",
+            "message",
+        ] {
+            if let Some(value) = object.get(key).and_then(Value::as_str) {
+                return Some(value.to_string());
+            }
+        }
+    }
+
+    (!input.trim().is_empty()).then(|| input.to_string())
 }
 
 #[cfg(test)]
 mod tests {
     use super::{
-        PermissionMode, PermissionOutcome, PermissionPolicy, PermissionPromptDecision,
-        PermissionPrompter, PermissionRequest,
+        PermissionContext, PermissionMode, PermissionOutcome, PermissionOverride, PermissionPolicy,
+        PermissionPromptDecision, PermissionPrompter, PermissionRequest,
     };
+    use crate::config::RuntimePermissionRuleConfig;
 
     struct RecordingPrompter {
         seen: Vec<PermissionRequest>,
@@ -229,4 +556,120 @@ mod tests {
             PermissionOutcome::Deny { reason } if reason == "not now"
         ));
     }
+
+    #[test]
+    fn applies_rule_based_denials_and_allows() {
+        let rules = RuntimePermissionRuleConfig::new(
+            vec!["bash(git:*)".to_string()],
+            vec!["bash(rm -rf:*)".to_string()],
+            Vec::new(),
+        );
+        let policy = PermissionPolicy::new(PermissionMode::ReadOnly)
+            .with_tool_requirement("bash", PermissionMode::DangerFullAccess)
+            .with_permission_rules(&rules);
+
+        assert_eq!(
+            policy.authorize("bash", r#"{"command":"git status"}"#, None),
+            PermissionOutcome::Allow
+        );
+        assert!(matches!(
+            policy.authorize("bash", r#"{"command":"rm -rf /tmp/x"}"#, None),
+            PermissionOutcome::Deny { reason } if reason.contains("denied by rule")
+        ));
+    }
+
+    #[test]
+    fn ask_rules_force_prompt_even_when_mode_allows() {
+        let rules = RuntimePermissionRuleConfig::new(
+            Vec::new(),
+            Vec::new(),
+            vec!["bash(git:*)".to_string()],
+        );
+        let policy = PermissionPolicy::new(PermissionMode::DangerFullAccess)
+            .with_tool_requirement("bash", PermissionMode::DangerFullAccess)
+            .with_permission_rules(&rules);
+        let mut prompter = RecordingPrompter {
+            seen: Vec::new(),
+            allow: true,
+        };
+
+        let outcome = policy.authorize("bash", r#"{"command":"git status"}"#, Some(&mut prompter));
+
+        assert_eq!(outcome, PermissionOutcome::Allow);
+        assert_eq!(prompter.seen.len(), 1);
+        assert!(prompter.seen[0]
+            .reason
+            .as_deref()
+            .is_some_and(|reason| reason.contains("ask rule")));
+    }
+
+    #[test]
+    fn hook_allow_still_respects_ask_rules() {
+        let rules = RuntimePermissionRuleConfig::new(
+            Vec::new(),
+            Vec::new(),
+            vec!["bash(git:*)".to_string()],
+        );
+        let policy = PermissionPolicy::new(PermissionMode::ReadOnly)
+            .with_tool_requirement("bash", PermissionMode::DangerFullAccess)
+            .with_permission_rules(&rules);
+        let context = PermissionContext::new(
+            Some(PermissionOverride::Allow),
+            Some("hook approved".to_string()),
+        );
+        let mut prompter = RecordingPrompter {
+            seen: Vec::new(),
+            allow: true,
+        };
+
+        let outcome = policy.authorize_with_context(
+            "bash",
+            r#"{"command":"git status"}"#,
+            &context,
+            Some(&mut prompter),
+        );
+
+        assert_eq!(outcome, PermissionOutcome::Allow);
+        assert_eq!(prompter.seen.len(), 1);
+    }
+
+    #[test]
+    fn hook_deny_short_circuits_permission_flow() {
+        let policy = PermissionPolicy::new(PermissionMode::DangerFullAccess)
+            .with_tool_requirement("bash", PermissionMode::DangerFullAccess);
+        let context = PermissionContext::new(
+            Some(PermissionOverride::Deny),
+            Some("blocked by hook".to_string()),
+        );
+
+        assert_eq!(
+            policy.authorize_with_context("bash", "{}", &context, None),
+            PermissionOutcome::Deny {
+                reason: "blocked by hook".to_string(),
+            }
+        );
+    }
+
+    #[test]
+    fn hook_ask_forces_prompt() {
+        let policy = PermissionPolicy::new(PermissionMode::DangerFullAccess)
+            .with_tool_requirement("bash", PermissionMode::DangerFullAccess);
+        let context = PermissionContext::new(
+            Some(PermissionOverride::Ask),
+            Some("hook requested confirmation".to_string()),
+        );
+        let mut prompter = RecordingPrompter {
+            seen: Vec::new(),
+            allow: true,
+        };
+
+        let outcome = policy.authorize_with_context("bash", "{}", &context, Some(&mut prompter));
+
+        assert_eq!(outcome, PermissionOutcome::Allow);
+        assert_eq!(prompter.seen.len(), 1);
+        assert_eq!(
+            prompter.seen[0].reason.as_deref(),
+            Some("hook requested confirmation")
+        );
+    }
 }

rust/crates/rusty-claude-cli/Cargo.toml

@@ -19,7 +19,7 @@ rustyline = "15"
 runtime = { path = "../runtime" }
 serde_json = "1"
 syntect = "5"
-tokio = { version = "1", features = ["rt-multi-thread", "time"] }
+tokio = { version = "1", features = ["rt-multi-thread", "signal", "time"] }
 tools = { path = "../tools" }
 
 [lints]

rust/crates/rusty-claude-cli/src/main.rs

@@ -9,6 +9,8 @@ use std::io::{self, Read, Write};
 use std::net::TcpListener;
 use std::path::{Path, PathBuf};
 use std::process::Command;
+use std::sync::mpsc::{self, Receiver, Sender};
+use std::thread::{self, JoinHandle};
 use std::time::{SystemTime, UNIX_EPOCH};
 
 use api::{
@@ -27,8 +29,8 @@ use runtime::{
     clear_oauth_credentials, generate_pkce_pair, generate_state, load_system_prompt,
     parse_oauth_callback_request_target, save_oauth_credentials, ApiClient, ApiRequest,
     AssistantEvent, CompactionConfig, ConfigLoader, ConfigSource, ContentBlock,
-    ConversationMessage, ConversationRuntime, MessageRole, OAuthAuthorizationRequest,
-    OAuthConfig, OAuthTokenExchangeRequest, PermissionMode, PermissionPolicy, ProjectContext, RuntimeError,
+    ConversationMessage, ConversationRuntime, MessageRole, OAuthAuthorizationRequest, OAuthConfig,
+    OAuthTokenExchangeRequest, PermissionMode, PermissionPolicy, ProjectContext, RuntimeError,
     Session, TokenUsage, ToolError, ToolExecutor, UsageTracker,
 };
 use serde_json::json;
@@ -984,6 +986,61 @@ struct LiveCli {
     session: SessionHandle,
 }
 
+struct HookAbortMonitor {
+    stop_tx: Option<Sender<()>>,
+    join_handle: Option<JoinHandle<()>>,
+}
+
+impl HookAbortMonitor {
+    fn spawn(abort_signal: runtime::HookAbortSignal) -> Self {
+        Self::spawn_with_waiter(abort_signal, move |stop_rx, abort_signal| {
+            let Ok(runtime) = tokio::runtime::Builder::new_current_thread()
+                .enable_all()
+                .build()
+            else {
+                return;
+            };
+
+            runtime.block_on(async move {
+                let wait_for_stop = tokio::task::spawn_blocking(move || {
+                    let _ = stop_rx.recv();
+                });
+
+                tokio::select! {
+                    result = tokio::signal::ctrl_c() => {
+                        if result.is_ok() {
+                            abort_signal.abort();
+                        }
+                    }
+                    _ = wait_for_stop => {}
+                }
+            });
+        })
+    }
+
+    fn spawn_with_waiter<F>(abort_signal: runtime::HookAbortSignal, wait_for_interrupt: F) -> Self
+    where
+        F: FnOnce(Receiver<()>, runtime::HookAbortSignal) + Send + 'static,
+    {
+        let (stop_tx, stop_rx) = mpsc::channel();
+        let join_handle = thread::spawn(move || wait_for_interrupt(stop_rx, abort_signal));
+
+        Self {
+            stop_tx: Some(stop_tx),
+            join_handle: Some(join_handle),
+        }
+    }
+
+    fn stop(mut self) {
+        if let Some(stop_tx) = self.stop_tx.take() {
+            let _ = stop_tx.send(());
+        }
+        if let Some(join_handle) = self.join_handle.take() {
+            let _ = join_handle.join();
+        }
+    }
+}
+
 impl LiveCli {
     fn new(
         model: String,
@@ -1039,7 +1096,34 @@ impl LiveCli {
         )
     }
 
+    fn prepare_turn_runtime(
+        &self,
+        emit_output: bool,
+    ) -> Result<
+        (
+            ConversationRuntime<AnthropicRuntimeClient, CliToolExecutor>,
+            HookAbortMonitor,
+        ),
+        Box<dyn std::error::Error>,
+    > {
+        let hook_abort_signal = runtime::HookAbortSignal::new();
+        let runtime = build_runtime(
+            self.runtime.session().clone(),
+            self.model.clone(),
+            self.system_prompt.clone(),
+            true,
+            emit_output,
+            self.allowed_tools.clone(),
+            self.permission_mode,
+        )?
+        .with_hook_abort_signal(hook_abort_signal.clone());
+        let hook_abort_monitor = HookAbortMonitor::spawn(hook_abort_signal);
+
+        Ok((runtime, hook_abort_monitor))
+    }
+
     fn run_turn(&mut self, input: &str) -> Result<(), Box<dyn std::error::Error>> {
+        let (mut runtime, hook_abort_monitor) = self.prepare_turn_runtime(true)?;
         let mut spinner = Spinner::new();
         let mut stdout = io::stdout();
         spinner.tick(
@@ -1048,7 +1132,9 @@ impl LiveCli {
             &mut stdout,
         )?;
         let mut permission_prompter = CliPermissionPrompter::new(self.permission_mode);
-        let result = self.runtime.run_turn(input, Some(&mut permission_prompter));
+        let result = runtime.run_turn(input, Some(&mut permission_prompter));
+        hook_abort_monitor.stop();
+        self.runtime = runtime;
         match result {
             Ok(_) => {
                 spinner.finish(
@@ -1083,18 +1169,11 @@ impl LiveCli {
     }
 
     fn run_prompt_json(&mut self, input: &str) -> Result<(), Box<dyn std::error::Error>> {
-        let session = self.runtime.session().clone();
-        let mut runtime = build_runtime(
-            session,
-            self.model.clone(),
-            self.system_prompt.clone(),
-            true,
-            false,
-            self.allowed_tools.clone(),
-            self.permission_mode,
-        )?;
+        let (mut runtime, hook_abort_monitor) = self.prepare_turn_runtime(false)?;
         let mut permission_prompter = CliPermissionPrompter::new(self.permission_mode);
-        let summary = runtime.run_turn(input, Some(&mut permission_prompter))?;
+        let result = runtime.run_turn(input, Some(&mut permission_prompter));
+        hook_abort_monitor.stop();
+        let summary = result?;
         self.runtime = runtime;
         self.persist_session()?;
         println!(
@@ -1903,6 +1982,15 @@ fn build_system_prompt() -> Result<Vec<String>, Box<dyn std::error::Error>> {
     )?)
 }
 
+fn build_runtime_feature_config(
+) -> Result<runtime::RuntimeFeatureConfig, Box<dyn std::error::Error>> {
+    let cwd = env::current_dir()?;
+    Ok(ConfigLoader::default_for(cwd)
+        .load()?
+        .feature_config()
+        .clone())
+}
+
 fn build_runtime(
     session: Session,
     model: String,
@@ -1913,13 +2001,52 @@ fn build_runtime(
     permission_mode: PermissionMode,
 ) -> Result<ConversationRuntime<AnthropicRuntimeClient, CliToolExecutor>, Box<dyn std::error::Error>>
 {
-    Ok(ConversationRuntime::new(
+    let feature_config = build_runtime_feature_config()?;
+    let mut runtime = ConversationRuntime::new_with_features(
         session,
         AnthropicRuntimeClient::new(model, enable_tools, emit_output, allowed_tools.clone())?,
         CliToolExecutor::new(allowed_tools, emit_output),
-        permission_policy(permission_mode),
+        permission_policy(permission_mode, &feature_config),
         system_prompt,
-    ))
+        feature_config,
+    );
+    if emit_output {
+        runtime = runtime.with_hook_progress_reporter(Box::new(CliHookProgressReporter));
+    }
+    Ok(runtime)
+}
+
+struct CliHookProgressReporter;
+
+impl runtime::HookProgressReporter for CliHookProgressReporter {
+    fn on_event(&mut self, event: &runtime::HookProgressEvent) {
+        match event {
+            runtime::HookProgressEvent::Started {
+                event,
+                tool_name,
+                command,
+            } => eprintln!(
+                "[hook {event_name}] {tool_name}: {command}",
+                event_name = event.as_str()
+            ),
+            runtime::HookProgressEvent::Completed {
+                event,
+                tool_name,
+                command,
+            } => eprintln!(
+                "[hook done {event_name}] {tool_name}: {command}",
+                event_name = event.as_str()
+            ),
+            runtime::HookProgressEvent::Cancelled {
+                event,
+                tool_name,
+                command,
+            } => eprintln!(
+                "[hook cancelled {event_name}] {tool_name}: {command}",
+                event_name = event.as_str()
+            ),
+        }
+    }
 }
 
 struct CliPermissionPrompter {
@@ -1942,6 +2069,9 @@ impl runtime::PermissionPrompter for CliPermissionPrompter {
         println!("  Tool             {}", request.tool_name);
         println!("  Current mode     {}", self.current_mode.as_str());
         println!("  Required mode    {}", request.required_mode.as_str());
+        if let Some(reason) = &request.reason {
+            println!("  Reason           {reason}");
+        }
         println!("  Input            {}", request.input);
         print!("Approve this tool call? [y/N]: ");
         let _ = io::stdout().flush();
@@ -2354,13 +2484,15 @@ fn format_bash_result(icon: &str, parsed: &serde_json::Value) -> String {
         .get("backgroundTaskId")
         .and_then(|value| value.as_str())
     {
-        lines[0].push_str(&format!(" backgrounded ({task_id})"));
+        use std::fmt::Write as _;
+        let _ = write!(lines[0], " backgrounded ({task_id})");
     } else if let Some(status) = parsed
         .get("returnCodeInterpretation")
         .and_then(|value| value.as_str())
         .filter(|status| !status.is_empty())
     {
-        lines[0].push_str(&format!(" {status}"));
+        use std::fmt::Write as _;
+        let _ = write!(lines[0], " {status}");
     }
 
     if let Some(stdout) = parsed.get("stdout").and_then(|value| value.as_str()) {
@@ -2382,15 +2514,15 @@ fn format_read_result(icon: &str, parsed: &serde_json::Value) -> String {
     let path = extract_tool_path(file);
     let start_line = file
         .get("startLine")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(1);
     let num_lines = file
         .get("numLines")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(0);
     let total_lines = file
         .get("totalLines")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(num_lines);
     let content = file
         .get("content")
@@ -2416,8 +2548,7 @@ fn format_write_result(icon: &str, parsed: &serde_json::Value) -> String {
     let line_count = parsed
         .get("content")
         .and_then(|value| value.as_str())
-        .map(|content| content.lines().count())
-        .unwrap_or(0);
+        .map_or(0, |content| content.lines().count());
     format!(
         "{icon} \x1b[1;32m✏️ {} {path}\x1b[0m \x1b[2m({line_count} lines)\x1b[0m",
         if kind == "create" { "Wrote" } else { "Updated" },
@@ -2448,7 +2579,7 @@ fn format_edit_result(icon: &str, parsed: &serde_json::Value) -> String {
     let path = extract_tool_path(parsed);
     let suffix = if parsed
         .get("replaceAll")
-        .and_then(|value| value.as_bool())
+        .and_then(serde_json::Value::as_bool)
         .unwrap_or(false)
     {
         " (replace all)"
@@ -2476,7 +2607,7 @@ fn format_edit_result(icon: &str, parsed: &serde_json::Value) -> String {
 fn format_glob_result(icon: &str, parsed: &serde_json::Value) -> String {
     let num_files = parsed
         .get("numFiles")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(0);
     let filenames = parsed
         .get("filenames")
@@ -2500,11 +2631,11 @@ fn format_glob_result(icon: &str, parsed: &serde_json::Value) -> String {
 fn format_grep_result(icon: &str, parsed: &serde_json::Value) -> String {
     let num_matches = parsed
         .get("numMatches")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(0);
     let num_files = parsed
         .get("numFiles")
-        .and_then(|value| value.as_u64())
+        .and_then(serde_json::Value::as_u64)
         .unwrap_or(0);
     let content = parsed
         .get("content")
@@ -2663,12 +2794,14 @@ impl ToolExecutor for CliToolExecutor {
     }
 }
 
-fn permission_policy(mode: PermissionMode) -> PermissionPolicy {
-    tool_permission_specs()
-        .into_iter()
-        .fold(PermissionPolicy::new(mode), |policy, spec| {
-            policy.with_tool_requirement(spec.name, spec.required_permission)
-        })
+fn permission_policy(
+    mode: PermissionMode,
+    feature_config: &runtime::RuntimeFeatureConfig,
+) -> PermissionPolicy {
+    tool_permission_specs().into_iter().fold(
+        PermissionPolicy::new(mode).with_permission_rules(feature_config.permission_rules()),
+        |policy, spec| policy.with_tool_requirement(spec.name, spec.required_permission),
+    )
 }
 
 fn tool_permission_specs() -> Vec<ToolSpec> {
@@ -2817,12 +2950,17 @@ mod tests {
         normalize_permission_mode, parse_args, parse_git_status_metadata, print_help_to,
         push_output_block, render_config_report, render_memory_report, render_repl_help,
         resolve_model_alias, response_to_events, resume_supported_slash_commands, status_context,
-        CliAction, CliOutputFormat, SlashCommand, StatusUsage, DEFAULT_MODEL,
+        CliAction, CliOutputFormat, HookAbortMonitor, SlashCommand, StatusUsage, DEFAULT_MODEL,
     };
     use api::{MessageResponse, OutputContentBlock, Usage};
-    use runtime::{AssistantEvent, ContentBlock, ConversationMessage, MessageRole, PermissionMode};
+    use runtime::{
+        AssistantEvent, ContentBlock, ConversationMessage, HookAbortSignal, MessageRole,
+        PermissionMode,
+    };
     use serde_json::json;
     use std::path::PathBuf;
+    use std::sync::mpsc;
+    use std::time::Duration;
 
     #[test]
     fn defaults_to_repl_when_no_args() {
@@ -3481,4 +3619,43 @@ mod tests {
                 if name == "read_file" && input == "{\"path\":\"rust/Cargo.toml\"}"
         ));
     }
+
+    #[test]
+    fn hook_abort_monitor_stops_without_aborting() {
+        let abort_signal = HookAbortSignal::new();
+        let (ready_tx, ready_rx) = mpsc::channel();
+        let monitor = HookAbortMonitor::spawn_with_waiter(
+            abort_signal.clone(),
+            move |stop_rx, abort_signal| {
+                ready_tx.send(()).expect("ready signal");
+                let _ = stop_rx.recv();
+                assert!(!abort_signal.is_aborted());
+            },
+        );
+
+        ready_rx.recv().expect("waiter should be ready");
+        monitor.stop();
+
+        assert!(!abort_signal.is_aborted());
+    }
+
+    #[test]
+    fn hook_abort_monitor_propagates_interrupt() {
+        let abort_signal = HookAbortSignal::new();
+        let (done_tx, done_rx) = mpsc::channel();
+        let monitor = HookAbortMonitor::spawn_with_waiter(
+            abort_signal.clone(),
+            move |_stop_rx, abort_signal| {
+                abort_signal.abort();
+                done_tx.send(()).expect("done signal");
+            },
+        );
+
+        done_rx
+            .recv_timeout(Duration::from_secs(1))
+            .expect("interrupt should complete");
+        monitor.stop();
+
+        assert!(abort_signal.is_aborted());
+    }
 }

rust/crates/rusty-claude-cli/src/render.rs

@@ -286,7 +286,7 @@ impl TerminalRenderer {
     ) {
         match event {
             Event::Start(Tag::Heading { level, .. }) => {
-                self.start_heading(state, level as u8, output)
+                Self::start_heading(state, level as u8, output);
             }
             Event::End(TagEnd::Paragraph) => output.push_str("\n\n"),
             Event::Start(Tag::BlockQuote(..)) => self.start_quote(state, output),
@@ -426,7 +426,7 @@ impl TerminalRenderer {
         }
     }
 
-    fn start_heading(&self, state: &mut RenderState, level: u8, output: &mut String) {
+    fn start_heading(state: &mut RenderState, level: u8, output: &mut String) {
         state.heading_level = Some(level);
         if !output.is_empty() {
             output.push('\n');